View Issue Details
| ID | Project | Category | View Status | Date Submitted | Last Update |
|---|---|---|---|---|---|
| 0000370 | OpenFOAM | Bug | public | 2011-12-22 21:48 | 2012-01-31 11:56 |
| Reporter | Assigned To | ||||
| Priority | normal | Severity | minor | Reproducibility | always |
| Status | closed | Resolution | fixed | ||
| Platform | linux | OS | redhat | OS Version | (please specify) |
| Summary | 0000370: openmpi-1.5.3 doesn't work | ||||
| Description | Similar report as Bug-ID:0000296 After clean up and rebuild with openmpi-1.4.4 openmpi-1.4.4 works. log: ------------------------------ crc.nd.edu{zwei1}58: mpirun -np 4 icoFoam -parallel /*---------------------------------------------------------------------------*\ | ========= | | | \\ / F ield | OpenFOAM: The Open Source CFD Toolbox | | \\ / O peration | Version: 2.1.0 | | \\ / A nd | Web: www.OpenFOAM.org | | \\/ M anipulation | | \*---------------------------------------------------------------------------*/ Build : 2.1.0 Exec : icoFoam -parallel Date : Dec 22 2011 Time : 12:46:47 Host : "opteron.crc.nd.edu" PID : 26576 Case : /afs/crc.nd.edu/user/z/zwei1/OpenFOAM/OpenFOAM-2.1.0/tutorials/incompressible/icoFoam/test nProcs : 4 Slaves : 3 ( "opteron.crc.nd.edu.26577" "opteron.crc.nd.edu.26578" "opteron.crc.nd.edu.26579" ) Pstream initialized with: floatTransfer : 0 nProcsSimpleSum : 0 commsType : nonBlocking sigFpe : Enabling floating point exception trapping (FOAM_SIGFPE). fileModificationChecking : Monitoring run-time modified files using timeStampMaster allowSystemOperations : Disallowing user-supplied system call operations // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // Create time Create mesh for time = 0 [0] [2] [0] [0] --> FOAM FATAL IO ERROR: [0] error in IOstream "IOstream" for operation operator>>(Istream&, List<T>&) : reading first token [0] [2] [3] [0] file: IOstream at line 0. [0] [0] From function IOstream::fatalCheck(const char*) const [0] in file db/IOstreams/IOstreams/IOstream.C at line 114. [0] FOAM parallel run exiting [0] [1] [1] [3] [3] --> FOAM FATAL IO ERROR: [3] error in IOstream "IOstream" for operation operator>>(Istream&, List<T>&) : reading first token [3] [3] file: IOstream at line 0. [3] [2] --> FOAM FATAL IO ERROR: [2] error in IOstream "IOstream" for operation operator>>(Istream&, List<T>&) : reading first token [2] [2] file: IOstream at line 0. [2] [2] From function IOstream::fatalCheck(const char*) const [2] in file db/IOstreams/IOstreams/IOstream.C at line 114. [2] FOAM parallel run exiting [2] [1] --> FOAM FATAL IO ERROR: [1] error in IOstream "IOstream" for operation operator>>(Istream&, List<T>&) : reading first token [1] [1] file: IOstream at line 0. [3] From function IOstream::fatalCheck(const char*) const [3] in file db/IOstreams/IOstreams/IOstream.C at line 114. [3] FOAM parallel run exiting [3] [1] [1] From function IOstream::fatalCheck(const char*) const [1] in file db/IOstreams/IOstreams/IOstream.C at line 114. [1] FOAM parallel run exiting [1] -------------------------------------------------------------------------- MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD with errorcode 1. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. -------------------------------------------------------------------------- -------------------------------------------------------------------------- mpirun has exited due to process rank 2 with PID 26578 on node opteron.crc.nd.edu exiting without calling "finalize". This may have caused other processes in the application to be terminated by signals sent by mpirun (as reported here). -------------------------------------------------------------------------- [opteron.crc.nd.edu:26573] 3 more processes have sent help message help-mpi-api.txt / mpi-abort [opteron.crc.nd.edu:26573] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages | ||||
| Tags | No tags attached. | ||||
