-------------------------------------------------------------------------- A deprecated MCA parameter value was specified in the environment or on the command line. Deprecated MCA parameters should be avoided; they may disappear in future releases. Deprecated parameter: pls_rsh_agent -------------------------------------------------------------------------- /*---------------------------------------------------------------------------*\ | ========= | | | \\ / F ield | OpenFOAM: The Open Source CFD Toolbox | | \\ / O peration | Version: 1.7.x | | \\ / A nd | Web: www.OpenFOAM.com | | \\/ M anipulation | | \*---------------------------------------------------------------------------*/ Build : 1.7.x Exec : /Users/bgschaid/OpenFOAM/OpenFOAM-1.7.x/applications/bin/darwinIntel64DPDebug/snappyHexMesh -parallel Date : Nov 24 2010 Time : 20:05:30 Host : bgs-Greybook.local PID : 33431 Case : /private/tmp/iglooWithFridges nProcs : 2 Slaves : 1 ( bgs-Greybook.local.33432 ) Pstream initialized with: floatTransfer : 0 nProcsSimpleSum : 0 commsType : nonBlocking SigFpe : Enabling floating point exception trapping (FOAM_SIGFPE). // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * // Create time Create mesh for time = 0 Read mesh in = 0.15 s Overall mesh bounding box : (-2.03 -2 0) (8.03 8 5) Relative tolerance : 1e-06 Absolute matching distance : 1.50401e-05 SearchableCollection : fridgeFreezer instance : freezer surface : box1 scale : (1 1 1) coordsys : coordinateSystem origin: (0 0 0) e1: (1 0 0) e3: (0 0 1) instance : fridge surface : box1 scale : (1 1 1.1) coordsys : coordinateSystem origin: (0 0 1) e1: (1 0 0) e3: (0 0 1) SearchableCollection : twoFridgeFreezers instance : seal surface : box1 scale : (1 1 2.1) coordsys : coordinateSystem origin: (2 2 0) e1: (1 0 0) e3: (0 0 1) instance : herring surface : box1 scale : (1 1 2.1) coordsys : coordinateSystem origin: (3.5 3 0) e1: (1 0 0) e3: (0 0 1) Reading refinement surfaces. Read refinement surfaces in = 0.01 s Reading refinement shells. Read refinement shells in = 0 s Setting refinement level of surface to be consistent with shells. Checked shell refinement in = 0 s Determining initial surface intersections ----------------------------------------- Edge intersection testing: Number of edges : 25200 Number of edges to retest : 25200 Number of intersected edges : 1146 Calculated surface intersections in = 0.26 s Initial mesh : cells:8000 faces:25200 points:9261 Cells per refinement level: 0 8000 Adding patches for surface regions ---------------------------------- Patch Region ----- ------ igloo: 2 igloo_region0 twoFridgeFreezers: 3 twoFridgeFreezers_seal_0 4 twoFridgeFreezers_herring_1 Added patches in = 0.02 s Selecting decompositionMethod hierarchical Refinement phase ---------------- [1] Found point (3 0.28 0.43) in cell 240 on processor 1 [0] Found point (3 0.28 0.43) in cell 249 on processor 0 Reading external feature lines. Refinement level 3 for all cells crossed by feature "fridgeA.eMesh" (8 points, 12 edges). Read feature lines in = 0.05 s Feature refinement iteration 0 ------------------------------ Marked for refinement due to explicit features : 52 cells. Determined cells to refine in = 0.02 s Selected for feature refinement : 52 cells (out of 8000) Edge intersection testing: Number of edges : 26592 Number of edges to retest : 2260 Number of intersected edges : 1212 Refined mesh in = 0.3 s After refinement feature refinement iteration 0 : cells:8364 faces:26592 points:9969 Cells per refinement level: 0 7948 1 416 [1] [1] [1] --> FOAM FATAL ERROR: [1] size 13503 out of range 0 ... 13394 [1] [1] From function UList::checkSize(const label) [1] in file /Users/bgschaid/OpenFOAM/OpenFOAM-1.7.x/src/OpenFOAM/lnInclude/UListI.H at line 90. [1] FOAM parallel run aborting [1] [1] #0 Foam::getStackAddress(int)warning: UUID mismatch detected between: /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib.dSYM/Contents/Resources/DWARF/libOpenFOAM.dylib... at printStack.C:219 [1] #1 Foam::backtrace(void**, unsigned int)warning: UUID mismatch detected between: /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib.dSYM/Contents/Resources/DWARF/libOpenFOAM.dylib... at printStack.C:254 [1] #2 Foam::error::printStack(Foam::Ostream&)warning: UUID mismatch detected between: /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib.dSYM/Contents/Resources/DWARF/libOpenFOAM.dylib... at printStack.C:324 [1] #3 Foam::error::abort()warning: UUID mismatch detected between: /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib.dSYM/Contents/Resources/DWARF/libOpenFOAM.dylib... at error.C:230 [1] #4 Foam::Ostream& Foam::operator<< (Foam::Ostream&, Foam::errorManip) at errorManip.H:86 [1] #5 Foam::UList::checkSize(int) const at UListI.H:94 [1] #6 Foam::SubList::SubList(Foam::UList const&, int, int) at SubListI.H:60 [1] #7 Foam::polyPatch::polyPatch(Foam::polyPatch const&, Foam::polyBoundaryMesh const&, int, int, int)warning: UUID mismatch detected between: /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib.dSYM/Contents/Resources/DWARF/libOpenFOAM.dylib... at meshes/polyMesh/polyPatches/polyPatch/polyPatch.C:165 [1] #8 Foam::wallPolyPatch::wallPolyPatch(Foam::wallPolyPatch const&, Foam::polyBoundaryMesh const&, int, int, int)warning: UUID mismatch detected between: /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libOpenFOAM.dylib.dSYM/Contents/Resources/DWARF/libOpenFOAM.dylib... at meshes/polyMesh/polyPatches/derived/wall/wallPolyPatch.C:85 [1] #9 Foam::wallPolyPatch::clone(Foam::polyBoundaryMesh const&, int, int, int) constwarning: UUID mismatch detected between: /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libmeshTools.dylib /Volumes/Foam/OpenFOAM-1.7.x/lib/darwinIntel64DPDebug/libmeshTools.dylib.dSYM/Contents/Resources/DWARF/libmeshTools.dylib... at wallPolyPatch.H:113 [1] #10 Foam::polyMeshAdder::add(Foam::polyMesh&, Foam::polyMesh const&, Foam::faceCoupleInfo const&, bool) at polyMeshAdder/polyMeshAdder.C:1647 [1] #11 Foam::fvMeshAdder::add(Foam::fvMesh&, Foam::fvMesh const&, Foam::faceCoupleInfo const&, bool) at fvMeshAdder/fvMeshAdder.C:88 [1] #12 Foam::fvMeshDistribute::distribute(Foam::List const&) at fvMeshDistribute/fvMeshDistribute.C:2113 [1] #13 Foam::meshRefinement::balance(bool, bool, Foam::Field const&, Foam::decompositionMethod&, Foam::fvMeshDistribute&) at autoHexMesh/meshRefinement/meshRefinement.C:1253 [1] #14 Foam::meshRefinement::refineAndBalance(Foam::string const&, Foam::decompositionMethod&, Foam::fvMeshDistribute&, Foam::List const&, double) at autoHexMesh/meshRefinement/meshRefinementRefine.C:1318 [1] #15 Foam::autoRefineDriver::featureEdgeRefine(Foam::refinementParameters const&, Foam::PtrList const&, int, int) at autoHexMesh/autoHexMeshDriver/autoRefineDriver.C:235 [1] #16 Foam::autoRefineDriver::doRefine(Foam::dictionary const&, Foam::refinementParameters const&, bool, Foam::dictionary const&) at autoHexMesh/autoHexMeshDriver/autoRefineDriver.C:810 [1] #17 main at snappyHexMesh.C:390 [1] #18 start at sphericalTensor.H:54 -------------------------------------------------------------------------- MPI_ABORT was invoked on rank 1 in communicator MPI_COMM_WORLD with errorcode 1. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. -------------------------------------------------------------------------- -------------------------------------------------------------------------- mpirun has exited due to process rank 1 with PID 33432 on node bgs-Greybook.local exiting without calling "finalize". This may have caused other processes in the application to be terminated by signals sent by mpirun (as reported here). --------------------------------------------------------------------------